Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s18 | RC54_10175 | B2JG20 | Positive | 2259980 - 2260264 | 10979.3 |
| 50s ribosomal protein l9 | RC54_10180 | Q0K9E8 | Positive | 2260291 - 2260743 | 15835.2 |
| replicative dna helicase | RC54_10185 | Q8X5V3 | Positive | 2260956 - 2262401 | 53077.4 |
| duf47 domain-containing protein | RC54_10190 | O30498 | Positive | 2262610 - 2263236 | 23558.5 |
| inorganic phosphate transporter | RC54_10195 | O30499 | Positive | 2263298 - 2264305 | 35443.2 |
| phoh family protein | RC54_10200 | O07635 | Negative | 2264407 - 2266074 | 61191.2 |
| peroxiredoxin | RC54_10205 | Q8P9V9 | Negative | 2266595 - 2267071 | 17892.6 |
| xylanase | RC54_10210 | Q3KCC0 | Negative | 2267122 - 2268063 | 35191.1 |
| bifunctional udp-4-keto-pentose/udp-xylose synthase | RC54_10215 | Q1C742 | Negative | 2268360 - 2269415 | 39754.7 |
| formyltransferase | RC54_10220 | A0KGY6 | Negative | 2269445 - 2270362 | 33391.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



