Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iia dna topoisomerase subunit b | RC54_08925 | P0A2I6 | Negative | 2000641 - 2002629 | 72318.1 |
| amidase | RC54_08930 | Q38M35 | Negative | 2002890 - 2004242 | 46138.4 |
| duf2848 domain-containing protein | RC54_08935 | Not Available | Negative | 2004325 - 2005002 | 24392.9 |
| mfs transporter | RC54_08940 | Q44470 | Negative | 2005101 - 2006414 | 46534.5 |
| lysr family transcriptional regulator | RC54_08945 | P25544 | Negative | 2006686 - 2007621 | 34735.0 |
| murr/rpir family transcriptional regulator | RC54_08950 | P44540 | Positive | 2008021 - 2009013 | 35276.3 |
| isoaspartyl peptidase/l-asparaginase | RC54_08955 | Q7CQV5 | Positive | 2009010 - 2009987 | 33495.5 |
| abc transporter atp-binding protein | RC54_08960 | Q6D3A9 | Positive | 2010013 - 2011866 | 67825.8 |
| glutathione abc transporter substrate-binding protein gsib | RC54_08965 | Q6D3B0 | Positive | 2011961 - 2013532 | 58691.3 |
| glutathione abc transporter permease gsic | RC54_08970 | Q8ZQM2 | Positive | 2013664 - 2014584 | 33926.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



