Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema ruminis |
| Strain | Ru1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
801950 bp
Thymine Count
801060 bp
Guanine Count
651183 bp
Cytosine Count
641389 bp
Genome Length
2895582 bp
Protein-coding Genes
2454 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit a | DYE50_00260 | O83051 | Positive | 51526 - 54039 | 93005.8 |
| plp-dependent aminotransferase family protein | DYE50_00265 | P94426 | Negative | 56712 - 58118 | 53646.4 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | DYE50_00270 | B8FZR3 | Positive | 58213 - 59088 | 31513.5 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | DYE50_00275 | B8FZR4 | Positive | 59089 - 59658 | 20798.5 |
| arac family transcriptional regulator | DYE50_00280 | P96660 | Negative | 59670 - 60578 | 35366.3 |
| mate family efflux transporter | DYE50_00285 | Q9WZS2 | Positive | 60667 - 62004 | 48377.4 |
| hypothetical protein | DYE50_00290 | P54734 | Positive | 62051 - 62623 | 22320.2 |
| arac family transcriptional regulator | DYE50_00295 | P0ACH9 | Negative | 62640 - 63491 | 32948.1 |
| iron-containing alcohol dehydrogenase | DYE50_00300 | O05240 | Positive | 63604 - 64779 | 42622.2 |
| nad-dependent epimerase/dehydratase family protein | DYE50_00305 | Q9SA52 | Positive | 64801 - 65832 | 38692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

