Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| swim zinc finger family protein | LWP59_29275 | O53500 | Negative | 5967382 - 5968518 | 40725.2 |
| dead/deah box helicase | LWP59_29280 | P94593 | Negative | 5968515 - 5971256 | 99019.3 |
| acyl-coa dehydrogenase | LWP59_29285 | P96855 | Negative | 5971287 - 5973305 | 70781.6 |
| cholesterol catabolism transcriptional regulator kstr | LWP59_29290 | Q0S868 | Positive | 5973398 - 5974024 | 23168.9 |
| hypothetical protein | LWP59_29295 | P65305 | Positive | 5974142 - 5975083 | 32676.4 |
| tigr03557 family f420-dependent llm class oxidoreductase | LWP59_29300 | A4T163 | Negative | 5975090 - 5976079 | 36243.1 |
| llm class f420-dependent oxidoreductase | LWP59_29305 | P9WKN4 | Negative | 5976118 - 5976933 | 29382.1 |
| llm class f420-dependent oxidoreductase | LWP59_29310 | P9WKN4 | Negative | 5976930 - 5977748 | 30128.8 |
| class i sam-dependent methyltransferase | LWP59_29315 | B1MCE2 | Positive | 5977815 - 5978483 | 24281.6 |
| methylmalonyl-coa mutase family protein | LWP59_29320 | Q5Z110 | Negative | 5978607 - 5981843 | 118657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
