Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | LWP59_28875 | P9WIN0 | Positive | 5880674 - 5881435 | 26599.8 |
| rna polymerase sigma factor | LWP59_28880 | P0A603 | Positive | 5881624 - 5883003 | 50862.6 |
| amino acid permease | LWP59_28885 | Q797A7 | Positive | 5883110 - 5884573 | 50844.0 |
| hypothetical protein | LWP59_28890 | Not Available | Negative | 5884536 - 5885309 | 26900.9 |
| glutamine synthetase | LWP59_28895 | Q9KZC7 | Negative | 5885310 - 5886644 | 46473.0 |
| hypothetical protein | LWP59_28900 | Not Available | Positive | 5887052 - 5887231 | 6354.62 |
| dead/deah box helicase | LWP59_28905 | P9WL20 | Negative | 5887486 - 5889249 | 63790.8 |
| yihy/virulence factor brkb family protein | LWP59_28910 | O34437 | Positive | 5889456 - 5890592 | 41561.4 |
| duf3039 domain-containing protein | LWP59_28915 | Not Available | Negative | 5890642 - 5890896 | 9218.92 |
| fxsa family protein | LWP59_28920 | Not Available | Positive | 5890974 - 5891054 | 2906.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
