Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | LWP59_28725 | H8EXN1 | Negative | 5851253 - 5851801 | 20584.4 |
| hypothetical protein | LWP59_28730 | Not Available | Positive | 5852042 - 5852578 | 18390.4 |
| duf4142 domain-containing protein | LWP59_28735 | Not Available | Positive | 5852670 - 5853338 | 24431.3 |
| ferric reductase-like transmembrane domain-containing protein | LWP59_28740 | Not Available | Positive | 5853354 - 5853965 | 22209.0 |
| ferredoxin | LWP59_28745 | P29604 | Positive | 5853962 - 5854189 | 8652.38 |
| nad(p)/fad-dependent oxidoreductase | LWP59_28750 | P43494 | Positive | 5854182 - 5855444 | 45916.1 |
| helix-turn-helix domain-containing protein | LWP59_28755 | O53333 | Positive | 5855446 - 5855733 | 10554.6 |
| pucr family transcriptional regulator | LWP59_28760 | P49694 | Negative | 5855735 - 5857180 | 50661.1 |
| sodium:solute symporter | LWP59_28765 | O06493 | Positive | 5857284 - 5858714 | 49515.8 |
| agmatinase | LWP59_28770 | Q8KZT5 | Positive | 5858711 - 5859712 | 35299.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
