Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic-ring-hydroxylating dioxygenase subunit beta | LWP59_20420 | Q3C1E2 | Positive | 4191273 - 4191737 | 17102.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | LWP59_20425 | Q3C1E1 | Positive | 4191734 - 4192702 | 32342.1 |
| 2fe-2s iron-sulfur cluster-binding protein | LWP59_20430 | Q3C1E0 | Positive | 4192702 - 4193712 | 36059.9 |
| mfs transporter | LWP59_20435 | Q51955 | Positive | 4193742 - 4195109 | 48083.7 |
| duf5997 family protein | LWP59_20440 | Not Available | Negative | 4195362 - 4195742 | 13885.6 |
| lysr family substrate-binding domain-containing protein | LWP59_20445 | P52677 | Positive | 4195801 - 4196514 | 25583.7 |
| rok family protein | LWP59_20450 | Q44406 | Negative | 4196521 - 4197759 | 42419.8 |
| sugar abc transporter substrate-binding protein | LWP59_20455 | Q578M8 | Positive | 4197927 - 4199243 | 45828.6 |
| sugar abc transporter permease | LWP59_20460 | O51924 | Positive | 4199330 - 4200316 | 36716.1 |
| carbohydrate abc transporter permease | LWP59_20465 | P77716 | Positive | 4200309 - 4201184 | 31682.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
