Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LWP59_19320 | Not Available | Positive | 3959740 - 3960378 | 21532.2 |
| alpha/beta hydrolase | LWP59_19325 | P96402 | Negative | 3960365 - 3961165 | 27918.0 |
| llm class flavin-dependent oxidoreductase | LWP59_19330 | P55684 | Negative | 3961162 - 3962172 | 37029.1 |
| marr family transcriptional regulator | LWP59_19335 | P42195 | Positive | 3962265 - 3962768 | 17691.2 |
| rhamnulokinase | LWP59_19340 | Q8A1A3 | Negative | 3962887 - 3964335 | 50540.7 |
| l-fucose/l-arabinose isomerase family protein | LWP59_19345 | A1SDP0 | Negative | 3964335 - 3965786 | 51939.2 |
| bifunctional aldolase/short-chain dehydrogenase | LWP59_19350 | P40747 | Negative | 3965801 - 3967831 | 71070.6 |
| l-rhamnose isomerase | LWP59_19355 | Q92S14 | Negative | 3967837 - 3969012 | 43091.9 |
| l-rhamnose mutarotase | LWP59_19360 | Q6DA26 | Negative | 3969009 - 3969338 | 12586.9 |
| rhamnose abc transporter substrate-binding protein | LWP59_19365 | A1JJ52 | Negative | 3969398 - 3970462 | 36765.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
