Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | LWP59_16865 | O05494 | Negative | 3468028 - 3468693 | 24724.5 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | LWP59_16870 | Q8GR45 | Negative | 3468740 - 3469807 | 40546.4 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | LWP59_16875 | P19059 | Negative | 3469804 - 3471297 | 53639.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | LWP59_16880 | Q5SJQ1 | Negative | 3471294 - 3472232 | 33951.6 |
| fumarylacetoacetate hydrolase family protein | LWP59_16885 | Q46978 | Negative | 3472263 - 3473705 | 50654.1 |
| lysr substrate-binding domain-containing protein | LWP59_16890 | O32255 | Negative | 3473789 - 3474709 | 33350.6 |
| hypothetical protein | LWP59_16895 | P80175 | Positive | 3474704 - 3475036 | 12280.9 |
| sigma-70 family rna polymerase sigma factor | LWP59_16900 | P66812 | Positive | 3475204 - 3475809 | 22513.2 |
| nitroreductase family protein | LWP59_16905 | O28017 | Positive | 3475922 - 3476395 | 17382.6 |
| arsb/nhad family transporter | LWP59_16910 | P9WPD9 | Negative | 3476423 - 3477715 | 45134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
