Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| msmeg_6728 family protein | LWP59_15915 | Not Available | Negative | 3278806 - 3279282 | 18146.4 |
| fad-dependent oxidoreductase | LWP59_15920 | P72449 | Negative | 3279290 - 3280777 | 54252.6 |
| class i sam-dependent methyltransferase | LWP59_15925 | B0RCZ0 | Negative | 3280774 - 3281454 | 24286.2 |
| lycopene cyclase domain-containing protein | LWP59_15930 | Not Available | Negative | 3281451 - 3281762 | 11674.6 |
| lycopene cyclase domain-containing protein | LWP59_15935 | E4ZUB5 | Negative | 3281759 - 3282076 | 11664.8 |
| phytoene/squalene synthase family protein | LWP59_15940 | P54977 | Negative | 3282096 - 3283019 | 34135.9 |
| srpbcc family protein | LWP59_15945 | P55049 | Positive | 3283121 - 3283582 | 17348.2 |
| hypothetical protein | LWP59_15950 | Not Available | Positive | 3284003 - 3284935 | 33509.0 |
| hypothetical protein | LWP59_15955 | Not Available | Positive | 3285152 - 3285724 | 19624.1 |
| tetr/acrr family transcriptional regulator | LWP59_15960 | Q7TVI1 | Negative | 3285715 - 3286347 | 23400.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
