Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/oligopeptide/nickel abc transporter permease/atp-binding protein | LWP59_15815 | P04285 | Positive | 3258833 - 3260731 | 65537.9 |
| abc transporter atp-binding protein | LWP59_15820 | Q53194 | Positive | 3260728 - 3261660 | 32878.6 |
| serine hydrolase | LWP59_15825 | Q06317 | Positive | 3261687 - 3265022 | 118238.0 |
| gnat family n-acetyltransferase | LWP59_15830 | Not Available | Positive | 3265119 - 3266021 | 31967.2 |
| o-succinylbenzoate synthase | LWP59_15835 | Q44244 | Positive | 3266018 - 3267124 | 39435.6 |
| helix-turn-helix domain-containing protein | LWP59_15840 | P71073 | Positive | 3267210 - 3268862 | 58561.4 |
| stas domain-containing protein | LWP59_15845 | P9WGE0 | Positive | 3269007 - 3269393 | 12895.7 |
| acyl-coa dehydrogenase family protein | LWP59_15850 | Q96329 | Negative | 3269400 - 3270584 | 43220.6 |
| coa transferase | LWP59_15855 | Q7CXU0 | Negative | 3270581 - 3271798 | 43401.6 |
| helix-turn-helix domain-containing protein | LWP59_15860 | Not Available | Negative | 3271916 - 3272320 | 14359.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
