Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase 2c domain-containing protein | LWP59_14465 | Q92AI7 | Positive | 2984967 - 2985959 | 33861.3 |
| vwa domain-containing protein | LWP59_14470 | Not Available | Positive | 2985952 - 2987253 | 45647.2 |
| fha domain-containing protein | LWP59_14475 | Q6NHD4 | Positive | 2987253 - 2987882 | 22228.0 |
| response regulator transcription factor | LWP59_14480 | P55184 | Negative | 2987887 - 2988537 | 22920.6 |
| histidine kinase | LWP59_14485 | P94438 | Negative | 2988512 - 2989708 | 42263.3 |
| glycosyltransferase family 39 protein | LWP59_14490 | Not Available | Positive | 2989850 - 2991283 | 52439.0 |
| merr family transcriptional regulator | LWP59_14495 | P20102 | Negative | 2991277 - 2991969 | 25896.4 |
| lysr family transcriptional regulator | LWP59_14500 | A4QH19 | Negative | 2992156 - 2993043 | 31258.6 |
| fxsa family protein | LWP59_14505 | Not Available | Positive | 2993451 - 2993936 | 16946.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | LWP59_14510 | P0A957 | Negative | 2994227 - 2994922 | 24130.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
