Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloregulator arsr/smtb family transcription factor | LWP59_11415 | Q55940 | Negative | 2347115 - 2347471 | 12784.5 |
| amidase | LWP59_11420 | O28325 | Positive | 2347526 - 2348938 | 49842.3 |
| paai family thioesterase | LWP59_11425 | P20378 | Positive | 2348990 - 2349490 | 17278.9 |
| hypothetical protein | LWP59_11430 | Not Available | Positive | 2349487 - 2350329 | 29772.6 |
| duf6480 family protein | LWP59_11435 | Not Available | Negative | 2350391 - 2350621 | 7708.25 |
| atp-dependent clp protease atp-binding subunit | LWP59_11440 | Q8EU05 | Negative | 2350618 - 2353140 | 92374.1 |
| sigb/sigf/sigg family rna polymerase sigma factor | LWP59_11445 | P9WGI2 | Negative | 2353180 - 2353974 | 29416.9 |
| duf4383 domain-containing protein | LWP59_11450 | Not Available | Positive | 2354123 - 2354554 | 15251.8 |
| glycosyltransferase | LWP59_11455 | Not Available | Positive | 2354606 - 2355580 | 35979.9 |
| glycosyltransferase | LWP59_11460 | D1BZ82 | Positive | 2355597 - 2356823 | 43835.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
