Bacillus amyloliquefaciens F

Gram-positiveRodMotileAerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus amyloliquefaciens F is a gram-positive, rod-shaped bacterium that exhibits aerobic respiration and is characterized by its motility, attributed to the presence of flagella. This species is classified as mesophilic, meaning it thrives within a moderate temperature range. It has a single replicon, which is typical for many bacteria. As a free-living organism, Bacillus amyloliquefaciens F does not rely on a host for survival, allowing it to inhabit diverse environments. Its ecological role is significant, as members of the Bacillus genus are known for their ability to produce various enzymes and metabolites, contributing to nutrient cycling in soil and other ecosystems. The accession number FN597644.1 provides a reference for genomic information related to this strain, facilitating further research and understanding of its biological capabilities. In summary, Bacillus amyloliquefaciens F demonstrates key traits that support its adaptability and ecological importance. Its free-living nature and enzymatic potential suggest a role in promoting soil health and plant growth, which underscores the bacterium's significance in agricultural and environmental contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus amyloliquefaciens
StrainF

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Bacillus amyloliquefaciens F
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacillus amyloliquefaciens F, Complete Genome

Gene Summary

Adenine Count

1078283 bp

Thymine Count

1067747 bp

Guanine Count

920529 bp

Cytosine Count

913640 bp

Genome Length

3980199 bp

Protein-coding Genes

3684 genes

Non-Coding Genes

375 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna gyrase (subunit b)BAMF_0006P05652Positive4871 - 679371748.1
dna gyrase (subunit a)BAMF_0007P05653Positive7010 - 946991848.2
16s ribosomal rnaNot AvailableNot AvailablePositive9773 - 11310Not Available
Trna-ileNot AvailableNot AvailablePositive11416 - 11492Not Available
Trna-alaNot AvailableNot AvailablePositive11507 - 11582Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive11666 - 14593Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive14647 - 14761Not Available
conserved hypothetical proteinBAMF_0008P37526Negative14807 - 1575737920.7
inosine-monophosphate dehydrogenaseBAMF_0009P21879Positive15878 - 1734452887.7
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5)BAMF_0010P08750Positive17497 - 1882848710.3

Displaying genes 321 – 330 of 3284 in total

Metabolites

1433 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1433 metabolites

Health Effects

No health effects information available for this bacterium.