Sphingomonas alpina S8-3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas alpina S8-3 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism has a single replicon, indicating a streamlined genomic structure. The genomic information for Sphingomonas alpina S8-3 is documented under accession CP061038.1, providing a comprehensive reference for researchers studying this species. This bacterium belongs to the genus Sphingomonas, which is known for its diverse metabolic capabilities, particularly in degrading various organic compounds. The presence of flagella suggests that Sphingomonas alpina S8-3 may exhibit active movement in its environment, potentially aiding in its ability to colonize different ecological niches. The ecological implications of Sphingomonas alpina S8-3 may include its role in bioremediation processes, as members of the Sphingomonas genus are often involved in the degradation of environmental pollutants. This trait, combined with its motility, suggests that Sphingomonas alpina S8-3 could effectively navigate and adapt to environments where organic contaminants are present, contributing to the overall health of ecosystems by facilitating the breakdown of harmful substances. Further research into its metabolic pathways and interactions within its habitat could provide deeper insights into its ecological role and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas alpina
StrainS8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas alpina S8-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas alpina S8-3, Complete Genome

Gene Summary

Adenine Count

935219 bp

Thymine Count

937585 bp

Guanine Count

1658068 bp

Cytosine Count

1666588 bp

Genome Length

5197460 bp

Protein-coding Genes

4782 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m15 family metallopeptidaseH3Z74_23465Not AvailableNegative4990869 - 499184633866.5
type vi secretion system-associated fha domain protein taghH3Z74_23470P22216Negative4991968 - 499347652387.8
hypothetical proteinH3Z74_23475Not AvailableNegative4993473 - 499404220454.3
type vi secretion system tip protein vgrgH3Z74_23480Q9I737Negative4994074 - 499608073984.6
ompa family proteinH3Z74_23485Q9I4Z4Positive4996429 - 499699820056.9
type vi secretion system impa family n-terminal domain-containing proteinH3Z74_23490Q9I750Positive4997046 - 499803535843.2
type vi secretion system contractile sheath small subunitH3Z74_23495Q9I749Positive4998113 - 499864919613.3
type vi secretion system contractile sheath large subunitH3Z74_23500Q9I748Positive4998676 - 500016955927.0
type vi secretion system tube protein hcpH3Z74_23505Q9I747Positive5000236 - 500073017590.5
virulence protein scie typeH3Z74_23510Q9I746Positive5000759 - 500153827937.1

Displaying genes 4691 – 4700 of 4846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.