Sphingomonas alpina S8-3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas alpina S8-3 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism has a single replicon, indicating a streamlined genomic structure. The genomic information for Sphingomonas alpina S8-3 is documented under accession CP061038.1, providing a comprehensive reference for researchers studying this species. This bacterium belongs to the genus Sphingomonas, which is known for its diverse metabolic capabilities, particularly in degrading various organic compounds. The presence of flagella suggests that Sphingomonas alpina S8-3 may exhibit active movement in its environment, potentially aiding in its ability to colonize different ecological niches. The ecological implications of Sphingomonas alpina S8-3 may include its role in bioremediation processes, as members of the Sphingomonas genus are often involved in the degradation of environmental pollutants. This trait, combined with its motility, suggests that Sphingomonas alpina S8-3 could effectively navigate and adapt to environments where organic contaminants are present, contributing to the overall health of ecosystems by facilitating the breakdown of harmful substances. Further research into its metabolic pathways and interactions within its habitat could provide deeper insights into its ecological role and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas alpina
StrainS8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas alpina S8-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas alpina S8-3, Complete Genome

Gene Summary

Adenine Count

935219 bp

Thymine Count

937585 bp

Guanine Count

1658068 bp

Cytosine Count

1666588 bp

Genome Length

5197460 bp

Protein-coding Genes

4782 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium-dependent transporterH3Z74_18215O07577Negative3929232 - 393060247690.9
marr family transcriptional regulatorH3Z74_18220B0FXI7Positive3930693 - 393118718669.4
voc family proteinH3Z74_18225Not AvailablePositive3931208 - 393160314805.8
m61 family metallopeptidaseH3Z74_18230Not AvailablePositive3931784 - 393369469996.5
acyl-coa thioesteraseH3Z74_18235Q31ME5Negative3933687 - 393410315075.3
indolepyruvate oxidoreductase subunit beta family proteinH3Z74_18240Not AvailableNegative3934112 - 393563854151.1
indolepyruvate ferredoxin oxidoreductase subunit alphaH3Z74_18245O27880Negative3935638 - 393776776607.0
hypothetical proteinH3Z74_18250A0NLY7Negative3937771 - 393855829040.1
winged helix-turn-helix transcriptional regulatorH3Z74_18255B0FXI7Positive3938539 - 393919224035.1
tonb-dependent receptorH3Z74_18260A1JTG3Negative3939273 - 394157382922.1

Displaying genes 3641 – 3650 of 4846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.