Sphingomonas alpina S8-3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas alpina S8-3 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism has a single replicon, indicating a streamlined genomic structure. The genomic information for Sphingomonas alpina S8-3 is documented under accession CP061038.1, providing a comprehensive reference for researchers studying this species. This bacterium belongs to the genus Sphingomonas, which is known for its diverse metabolic capabilities, particularly in degrading various organic compounds. The presence of flagella suggests that Sphingomonas alpina S8-3 may exhibit active movement in its environment, potentially aiding in its ability to colonize different ecological niches. The ecological implications of Sphingomonas alpina S8-3 may include its role in bioremediation processes, as members of the Sphingomonas genus are often involved in the degradation of environmental pollutants. This trait, combined with its motility, suggests that Sphingomonas alpina S8-3 could effectively navigate and adapt to environments where organic contaminants are present, contributing to the overall health of ecosystems by facilitating the breakdown of harmful substances. Further research into its metabolic pathways and interactions within its habitat could provide deeper insights into its ecological role and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas alpina
StrainS8-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas alpina S8-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas alpina S8-3, Complete Genome

Gene Summary

Adenine Count

935219 bp

Thymine Count

937585 bp

Guanine Count

1658068 bp

Cytosine Count

1666588 bp

Genome Length

5197460 bp

Protein-coding Genes

4782 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ybjn domain-containing proteinH3Z74_08710Not AvailablePositive1907065 - 190758618992.4
molybdenum cofactor biosynthesis protein bH3Z74_08715P0AF00Negative1907599 - 190812619061.8
lytic transglycosylase domain-containing proteinH3Z74_08720P39434Negative1908116 - 190991564747.0
uracil-dna glycosylaseH3Z74_08725Q8ZYS2Negative1909912 - 191064626394.6
electron transfer flavoprotein-ubiquinone oxidoreductaseH3Z74_08730Q9HZP5Positive1910765 - 191242660306.9
tetratricopeptide repeat proteinH3Z74_08735Not AvailablePositive1912470 - 191403554920.2
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseH3Z74_08740A5VDT3Positive1914032 - 191485928885.7
n-formylglutamate amidohydrolaseH3Z74_08745Not AvailablePositive1915065 - 191579925892.0
dihydroxy-acid dehydrataseH3Z74_08750A7HXI4Positive1915808 - 191752960275.2
hypothetical proteinH3Z74_08755Not AvailablePositive1917516 - 191794414846.8

Displaying genes 1741 – 1750 of 4846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.