Bifidobacterium catenulatum subsp. kashiwanohense HM2-2

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium catenulatum subsp. kashiwanohense HM2-2 is a Gram-positive anaerobic bacterium characterized by its rod shape and the presence of flagella. This subspecies is part of the Bifidobacterium genus, which is known for its role in the gut microbiota of various hosts, including Homo sapiens. The bacterium has a single replicon, indicating its genetic structure is organized into one chromosome. This can be significant for understanding its genetic stability and potential for adaptation within its ecological niche. The accession number AP012327.1 is associated with this specific strain, providing a reference for genomic studies and further research. As an anaerobe, Bifidobacterium catenulatum subsp. kashiwanohense HM2-2 thrives in oxygen-deprived environments, typical of the human gastrointestinal tract. Its flagella may contribute to motility, potentially aiding in colonization and interaction with the gut environment. Biologically, the presence of Bifidobacterium species in the human gut is linked to various health benefits, including the improvement of gut health and modulation of the immune system. The ecological insight here is that the adaptability of this bacterium, as demonstrated by its anaerobic nature and motility, may play a significant role in its survival and function within the complex microbial ecosystem of the human intestine. This highlights the importance of understanding specific strains like HM2-2 in the context of human health and microbiome dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium catenulatum
StrainHM2-2

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium catenulatum subsp. kashiwanohense HM2-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium catenulatum subsp. kashiwanohense HM2-2, Complete Genome

Gene Summary

Adenine Count

516193 bp

Thymine Count

505591 bp

Guanine Count

655789 bp

Cytosine Count

659661 bp

Genome Length

2337234 bp

Protein-coding Genes

1933 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-valNot AvailableNot AvailablePositive635596 - 635668Not Available
Trna-valNot AvailableNot AvailablePositive635714 - 635785Not Available
putative acetyltransferaseBBKW_0526Q9UT25Negative635871 - 63647922184.2
amino acid abc transporter permease componentBBKW_0527O34606Positive636754 - 63741024336.5
amino acid abc transporter permease componentBBKW_0528O34606Positive637397 - 63807125087.4
amino acid abc transporter atp-binding componentBBKW_0529Q8RQL7Positive638064 - 63890030606.5
amino acid abc transporter substrate binding componentBBKW_0530P27676Positive638973 - 63987832470.1
2-dehydropantoate 2-reductaseBBKW_0531Q9CFY8Positive640123 - 64114538142.1
putative lipoproteinBBKW_0532Q9KTJ7Positive641185 - 64206030733.7
putative abc transporter atp-binding componentBBKW_0533Q6D3Q6Positive642195 - 64325637997.0

Displaying genes 571 – 580 of 2017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.