Bifidobacterium catenulatum subsp. kashiwanohense HM2-2

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium catenulatum subsp. kashiwanohense HM2-2 is a Gram-positive anaerobic bacterium characterized by its rod shape and the presence of flagella. This subspecies is part of the Bifidobacterium genus, which is known for its role in the gut microbiota of various hosts, including Homo sapiens. The bacterium has a single replicon, indicating its genetic structure is organized into one chromosome. This can be significant for understanding its genetic stability and potential for adaptation within its ecological niche. The accession number AP012327.1 is associated with this specific strain, providing a reference for genomic studies and further research. As an anaerobe, Bifidobacterium catenulatum subsp. kashiwanohense HM2-2 thrives in oxygen-deprived environments, typical of the human gastrointestinal tract. Its flagella may contribute to motility, potentially aiding in colonization and interaction with the gut environment. Biologically, the presence of Bifidobacterium species in the human gut is linked to various health benefits, including the improvement of gut health and modulation of the immune system. The ecological insight here is that the adaptability of this bacterium, as demonstrated by its anaerobic nature and motility, may play a significant role in its survival and function within the complex microbial ecosystem of the human intestine. This highlights the importance of understanding specific strains like HM2-2 in the context of human health and microbiome dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium catenulatum
StrainHM2-2

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium catenulatum subsp. kashiwanohense HM2-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium catenulatum subsp. kashiwanohense HM2-2, Complete Genome

Gene Summary

Adenine Count

516193 bp

Thymine Count

505591 bp

Guanine Count

655789 bp

Cytosine Count

659661 bp

Genome Length

2337234 bp

Protein-coding Genes

1933 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna topoisomerase iv subunit bBBKW_1323O50627Negative1536530 - 153888186202.8
rna polymerase sigma factor rpodBBKW_1324P18183Negative1539003 - 154037951969.5
conserved hypothetical proteinBBKW_1325Not AvailableNegative1540540 - 154119924632.5
isoprenyl diphosphate synthaseBBKW_1326O53507Positive1541406 - 154249438948.1
putative serine-threonine protein kinaseBBKW_1327Q8G4G1Positive1542606 - 154483779940.2
putative acyltransferaseBBKW_1328O07584Negative1544976 - 154568625997.6
conserved hypothetical proteinBBKW_1329Not AvailablePositive1545708 - 154631321740.4
anthranilate phosphoribosyltransferaseBBKW_1330A0JX18Negative1546486 - 154754136286.3
preprotein translocase subunit secaBBKW_1331A1A268Negative1547801 - 1550677106997.0
conserved hypothetical proteinBBKW_1332O05886Negative1550890 - 155154924584.2

Displaying genes 1371 – 1380 of 2017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.