Saccharopolyspora spinosa

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharopolyspora

Description

Saccharopolyspora spinosa is a Gram-positive bacterium characterized by its single replicon, which is reflected in its genetic structure. Its genome is cataloged under the accession number CP185864.1, providing a reference point for studies related to its genetic makeup and potential applications. This organism is part of the broader ecological community where it plays a significant role, particularly in the production of bioactive compounds. Saccharopolyspora spinosa is known for its antibiotic properties, which can be beneficial in the development of pharmaceuticals. Its Gram-positive nature suggests that it could be involved in various biochemical processes that are typical of such bacteria, including the production of secondary metabolites. In an ecological context, the presence of Saccharopolyspora spinosa within its habitat may contribute to microbial diversity and the balance of microbial communities. The bacterium's ability to produce bioactive compounds could play a role in competition with other microorganisms, thereby influencing community structure and dynamics. The study of Saccharopolyspora spinosa is essential for understanding its potential applications in medicine and agriculture, particularly in the search for new antibiotics and other therapeutic agents.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharopolyspora
SpeciesSaccharopolyspora spinosa
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharopolyspora spinosa , Complete Genome

Gene Summary

Adenine Count

1445287 bp

Thymine Count

1447148 bp

Guanine Count

3020590 bp

Cytosine Count

3111644 bp

Genome Length

9024669 bp

Protein-coding Genes

8034 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family oxidoreductaseACOQFF_15255P39640Negative3175744 - 317652626854.8
cyclase family proteinACOQFF_15260A0NLY7Positive3177030 - 317780327574.6
phytoene desaturase family proteinACOQFF_15265P06108Positive3177806 - 317942256000.8
hypothetical proteinACOQFF_15270Not AvailablePositive3179606 - 31798669077.49
hypothetical proteinACOQFF_15275Not AvailableNegative3179972 - 318105738531.1
m15 family metallopeptidaseACOQFF_15280Not AvailableNegative3181394 - 318232033514.6
serine hydrolase domain-containing proteinACOQFF_15285P77619Negative3182352 - 318371047447.7
hypothetical proteinACOQFF_15290Not AvailableNegative3183735 - 31838784986.74
hypothetical proteinACOQFF_15295Not AvailableNegative3183962 - 31842139074.69
sdrd b-like domain-containing proteinACOQFF_15300O86488Positive3184583 - 318493912343.2

Displaying genes 3061 – 3070 of 8141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0034607dTDP-4-oxo-6-deoxy-D-glucoseC16H24N2O15P2Chemical structure of dTDP-4-oxo-6-deoxy-D-glucose16752-71-9
Average546.3137Da
Monoisotopic546.065191132Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039925Aeromonas jandaei Riv2Not available29908-03-0Not available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.