Saccharopolyspora spinosa

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharopolyspora

Description

Saccharopolyspora spinosa is a Gram-positive bacterium characterized by its single replicon, which is reflected in its genetic structure. Its genome is cataloged under the accession number CP185864.1, providing a reference point for studies related to its genetic makeup and potential applications. This organism is part of the broader ecological community where it plays a significant role, particularly in the production of bioactive compounds. Saccharopolyspora spinosa is known for its antibiotic properties, which can be beneficial in the development of pharmaceuticals. Its Gram-positive nature suggests that it could be involved in various biochemical processes that are typical of such bacteria, including the production of secondary metabolites. In an ecological context, the presence of Saccharopolyspora spinosa within its habitat may contribute to microbial diversity and the balance of microbial communities. The bacterium's ability to produce bioactive compounds could play a role in competition with other microorganisms, thereby influencing community structure and dynamics. The study of Saccharopolyspora spinosa is essential for understanding its potential applications in medicine and agriculture, particularly in the search for new antibiotics and other therapeutic agents.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharopolyspora
SpeciesSaccharopolyspora spinosa
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharopolyspora spinosa , Complete Genome

Gene Summary

Adenine Count

1445287 bp

Thymine Count

1447148 bp

Guanine Count

3020590 bp

Cytosine Count

3111644 bp

Genome Length

9024669 bp

Protein-coding Genes

8034 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglycosylase family proteinACOQFF_10560Q6M6W5Negative2134638 - 213499712236.6
atp-binding cassette domain-containing proteinACOQFF_10565O26543Positive2135583 - 213797384890.5
voc family proteinACOQFF_10570O32161Negative2138017 - 213842714979.8
helix-turn-helix domain-containing proteinACOQFF_10575O87389Negative2138438 - 213886916001.2
hypothetical proteinACOQFF_10580Not AvailableNegative2139071 - 21392686381.87
hsp20/alpha crystallin family proteinACOQFF_10585Q06823Positive2139659 - 214012917990.4
class i sam-dependent methyltransferaseACOQFF_10590Q562C4Negative2140357 - 214099222867.5
response regulator transcription factorACOQFF_10595Q04942Positive2141125 - 214182025554.7
hamp domain-containing sensor histidine kinaseACOQFF_10600I1WSZ3Positive2141843 - 214312944567.1
phosphatase pap2 family proteinACOQFF_10605P94571Negative2143115 - 214369920917.7

Displaying genes 2171 – 2180 of 8141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0034607dTDP-4-oxo-6-deoxy-D-glucoseC16H24N2O15P2Chemical structure of dTDP-4-oxo-6-deoxy-D-glucose16752-71-9
Average546.3137Da
Monoisotopic546.065191132Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039925Aeromonas jandaei Riv2Not available29908-03-0Not available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.