Dehalobacter restrictus PER-K23

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfitobacteriaceae

Genus

Dehalobacter

Description

Dehalobacter restrictus PER-K23 is a Gram-negative bacterium characterized by its anaerobic metabolic requirement. This organism is notable for its ability to dehalogenate various compounds, which positions it as a significant player in bioremediation processes. The bacterium is classified under the genus Dehalobacter, which is known for its capacity to detoxify halogenated organic compounds. Genomic analysis reveals that Dehalobacter restrictus PER-K23 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in specific metabolic pathways. The accession number for its genomic sequence is CP007033.1, which provides a reference point for further studies and comparisons with related species. The anaerobic nature of Dehalobacter restrictus PER-K23 suggests that it thrives in environments devoid of oxygen, such as contaminated groundwater or sediments where halogenated compounds are prevalent. This ecological niche allows the bacterium to play a crucial role in the degradation of pollutants, thereby aiding in the natural attenuation of environmental contaminants. In summary, Dehalobacter restrictus PER-K23 exhibits essential traits that highlight its importance in anaerobic environments, particularly in the context of bioremediation. Its unique metabolic capabilities, combined with its genomic characteristics, underscore its potential applications in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfitobacteriaceae
GenusDehalobacter
SpeciesDehalobacter restrictus
StrainPER-K23

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dehalobacter restrictus PER-K23, Complete Genome

Gene Summary

Adenine Count

817216 bp

Thymine Count

814531 bp

Guanine Count

652811 bp

Cytosine Count

658778 bp

Genome Length

2943336 bp

Protein-coding Genes

2790 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane proteinDEHRE_12830O59180Positive2551558 - 255242131479.4
hypothetical proteinDEHRE_12835Not AvailablePositive2552445 - 25526096360.62
abc transporter substrate-binding proteinDEHRE_12840O34805Positive2552951 - 255386833220.1
corrinoid abc transporter permeaseDEHRE_12845B0R5G3Positive2553883 - 255493237405.2
vitamin b12 abc transporter atpaseDEHRE_12850B0R5G4Positive2554933 - 255620446543.2
adenosylcobinamide amidohydrolaseDEHRE_12855Q59008Positive2556206 - 255739943830.6
atp-dependent proteaseDEHRE_12860B8FVI0Negative2557621 - 255887446114.0
trigger factorDEHRE_12865Q24SJ8Negative2558925 - 256027450634.6
hypothetical proteinDEHRE_12870Not AvailableNegative2560336 - 25604313572.48
udp-n-acetylglucosamine:lps n-acetylglucosamine transferaseDEHRE_12875B7H9Q4Negative2560586 - 256174342878.6

Displaying genes 2481 – 2490 of 2855 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.