Dehalobacter restrictus PER-K23

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfitobacteriaceae

Genus

Dehalobacter

Description

Dehalobacter restrictus PER-K23 is a Gram-negative bacterium characterized by its anaerobic metabolic requirement. This organism is notable for its ability to dehalogenate various compounds, which positions it as a significant player in bioremediation processes. The bacterium is classified under the genus Dehalobacter, which is known for its capacity to detoxify halogenated organic compounds. Genomic analysis reveals that Dehalobacter restrictus PER-K23 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in specific metabolic pathways. The accession number for its genomic sequence is CP007033.1, which provides a reference point for further studies and comparisons with related species. The anaerobic nature of Dehalobacter restrictus PER-K23 suggests that it thrives in environments devoid of oxygen, such as contaminated groundwater or sediments where halogenated compounds are prevalent. This ecological niche allows the bacterium to play a crucial role in the degradation of pollutants, thereby aiding in the natural attenuation of environmental contaminants. In summary, Dehalobacter restrictus PER-K23 exhibits essential traits that highlight its importance in anaerobic environments, particularly in the context of bioremediation. Its unique metabolic capabilities, combined with its genomic characteristics, underscore its potential applications in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfitobacteriaceae
GenusDehalobacter
SpeciesDehalobacter restrictus
StrainPER-K23

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dehalobacter restrictus PER-K23, Complete Genome

Gene Summary

Adenine Count

817216 bp

Thymine Count

814531 bp

Guanine Count

652811 bp

Cytosine Count

658778 bp

Genome Length

2943336 bp

Protein-coding Genes

2790 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfide reductaseDEHRE_11030P54432Negative2187739 - 218822118007.4
class v aminotransferaseDEHRE_11035D4GYV5Negative2188298 - 218963249440.6
mn-containing catalaseDEHRE_11040Q97FE0Negative2189692 - 219024621593.3
hypothetical proteinDEHRE_11045Not AvailableNegative2190290 - 219092524679.8
amino acid-binding proteinDEHRE_11050Not AvailableNegative2191090 - 219148514608.9
phenylacetate-coa ligaseDEHRE_11055P76085Negative2191523 - 219278846994.9
transposaseDEHRE_11060P15894Positive2193120 - 219441549639.9
s-adenosylmethionine synthetaseDEHRE_11065B8FSB9Negative2194825 - 219600643137.4
peptidase clppDEHRE_11070O35033Negative2196013 - 219722143592.2
dna-directed rna polymerase subunit omegaDEHRE_11075B8FSC1Negative2197208 - 21974237891.52

Displaying genes 2131 – 2140 of 2855 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.