Methanolobus zinderi SD-1

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanolobus

Description

Methanolobus zinderi SD-1 is a notable archaeal species characterized by a single replicon, which is indicative of its genomic organization. The complete genome of this organism is accessible under the accession number CP058215.1. This information is crucial for researchers who study archaeal genomics and the metabolic pathways of methanogens. As a methanogen, Methanolobus zinderi SD-1 plays a significant role in the carbon cycle, particularly in anaerobic environments where it contributes to methane production. Methanogens like M. zinderi are known to utilize methanol or other one-carbon compounds as substrates for growth, ultimately producing methane as a metabolic byproduct. This process is essential for energy flow in various ecosystems, particularly in wetlands and other anaerobic habitats. The presence of a single replicon suggests a streamlined genome, which may facilitate efficient replication and maintenance of essential genes required for its methanogenic lifestyle. This genomic simplicity is often seen in extremophiles and organisms adapted to specific ecological niches. In summary, Methanolobus zinderi SD-1, with its single replicon and accessible genomic data, provides critical insights into archaeal biology and the ecological roles of methanogens in carbon cycling. Understanding its genome can further elucidate the mechanisms underlying methane production and its implications for global carbon dynamics.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanolobus
SpeciesMethanolobus zinderi
StrainSD-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanolobus zinderi SD-1, Complete Genome

Gene Summary

Adenine Count

757865 bp

Thymine Count

755220 bp

Guanine Count

591328 bp

Cytosine Count

600540 bp

Genome Length

2704953 bp

Protein-coding Genes

2632 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
moad family proteinHWN40_06865P0A647Positive1393686 - 139396110181.9
abc transporter substrate-binding proteinHWN40_06870Q8YDR6Positive1394041 - 139494633229.1
phosphoenolpyruvate carboxylaseHWN40_06875Q469A3Negative1395025 - 139659357901.6
sulfate adenylyltransferase subunit cysnHWN40_06880Q5LES3Negative1396880 - 139843357446.1
sulfate adenylyltransferase subunit cysdHWN40_06885A1U490Negative1398424 - 139933235091.9
phosphoadenylyl-sulfate reductaseHWN40_06890B7VBC3Negative1399409 - 140015228753.9
4fe-4s binding proteinHWN40_06895Q58280Negative1400263 - 140112332102.4
inorganic phosphate transporterHWN40_06900O34734Positive1401304 - 140226032285.2
cupin domain-containing proteinHWN40_06905Not AvailableNegative1402363 - 140268011640.1
sulfurtransferase tusa family proteinHWN40_06910O29697Negative1402774 - 14030048559.42

Displaying genes 1371 – 1380 of 2687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.