Campylobacter subantarcticus R-3023

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter subantarcticus R-3023 is a Gram-negative bacterium characterized by its rod shape and microaerophilic oxygen requirement, meaning it thrives in environments with reduced oxygen levels. It possesses a single replicon, which is indicative of its genetic structure and organization. The strain has been cataloged under the accession number CP007773.1, providing a reference for genomic studies and further research. This bacterium is part of the Campylobacter genus, which is known for its role as a significant pathogen in both humans and animals. While specific pathogenic traits of Campylobacter subantarcticus R-3023 are not detailed in the supplied information, the genus is generally associated with gastrointestinal diseases, often linked to the consumption of contaminated food or water. From an ecological perspective, Campylobacter species are typically found in environments associated with animal feces, particularly in poultry and livestock, which can serve as reservoirs for these bacteria. The microaerophilic nature of C. subantarcticus R-3023 suggests that it may inhabit environments such as the gastrointestinal tracts of animals, where oxygen levels are lower than in the atmosphere. This adaptation allows it to survive in niches that may be inhospitable to other microorganisms. Understanding the ecological role of C. subantarcticus R-3023 could provide insights into the dynamics of microbial communities in subantarctic ecosystems and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter subantarcticus
StrainR-3023

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter subantarcticus R-3023
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter subantarcticus R-3023, Complete Genome

Gene Summary

Adenine Count

652721 bp

Thymine Count

648971 bp

Guanine Count

276236 bp

Cytosine Count

275067 bp

Genome Length

1852995 bp

Protein-coding Genes

1733 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 1CSUB8523_0013B9KE98Negative12927 - 1399440081.9
30s ribosomal protein s20CSUB8523_0014B9KE99Negative13998 - 142619947.16
23s rrna pseudouridine 2605 synthaseCSUB8523_0015P55986Negative14351 - 1511229161.4
mrna degradation ribonuclease j1/j2 (metallo-beta-lactamase superfamily)CSUB8523_0016P56185Negative15122 - 1706873725.1
16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferaseCSUB8523_0017Q5HS85Negative17034 - 1785531337.1
hypothetical protein, possible nucleoside phosphorylaseCSUB8523_0018Q1RHP2Positive17947 - 1848020125.2
23s rrna m2a2503 methyltransferase / trna m2a37 methyltransferaseCSUB8523_0019B9KEA4Positive18488 - 1955540272.2
23s rrna pseudouridine synthase, rlud familyCSUB8523_0021Q9ZMA1Negative20656 - 2156135132.1
adenylosuccinate lyaseCSUB8523_0022P56468Positive21641 - 2296950267.7
aerobic ribonucleoside-diphosphate reductase ia, b1 protein subunit nrdaCSUB8523_0023Q9ZLF9Positive22988 - 2536390201.8

Displaying genes 81 – 90 of 1833 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.