Campylobacter subantarcticus R-3023

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter subantarcticus R-3023 is a Gram-negative bacterium characterized by its rod shape and microaerophilic oxygen requirement, meaning it thrives in environments with reduced oxygen levels. It possesses a single replicon, which is indicative of its genetic structure and organization. The strain has been cataloged under the accession number CP007773.1, providing a reference for genomic studies and further research. This bacterium is part of the Campylobacter genus, which is known for its role as a significant pathogen in both humans and animals. While specific pathogenic traits of Campylobacter subantarcticus R-3023 are not detailed in the supplied information, the genus is generally associated with gastrointestinal diseases, often linked to the consumption of contaminated food or water. From an ecological perspective, Campylobacter species are typically found in environments associated with animal feces, particularly in poultry and livestock, which can serve as reservoirs for these bacteria. The microaerophilic nature of C. subantarcticus R-3023 suggests that it may inhabit environments such as the gastrointestinal tracts of animals, where oxygen levels are lower than in the atmosphere. This adaptation allows it to survive in niches that may be inhospitable to other microorganisms. Understanding the ecological role of C. subantarcticus R-3023 could provide insights into the dynamics of microbial communities in subantarctic ecosystems and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter subantarcticus
StrainR-3023

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter subantarcticus R-3023
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter subantarcticus R-3023, Complete Genome

Gene Summary

Adenine Count

652721 bp

Thymine Count

648971 bp

Guanine Count

276236 bp

Cytosine Count

275067 bp

Genome Length

1852995 bp

Protein-coding Genes

1733 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative cytochrome c oxidase-associated protein ccohCSUB8523_0397Not AvailablePositive367110 - 36762219971.7
exonuclease v, helicase addbCSUB8523_0398Not AvailablePositive367622 - 37000994113.8
exonuclease v, helicase addaCSUB8523_0399Q5FJX0Positive370006 - 372750106887.0
wg beta repeat domain-containing proteinCSUB8523_0400Not AvailableNegative372747 - 37382341475.5
50s ribosomal protein l13CSUB8523_0402A6Q6N9Positive374812 - 37523715877.5
30s ribosomal protein s9CSUB8523_0403B9KFA8Positive375240 - 37562914155.4
outer membrane fibronectin-binding proteinCSUB8523_0404A0A160PAH3Positive375882 - 37686836585.1
had-superfamily hydrolase, subfamily ia, probable phosphoglycolate phosphataseCSUB8523_0405Q9EYY5Positive376872 - 37751623977.0
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimericCSUB8523_0406Q2RMD6Positive377634 - 381188130834.0
hypothetical proteinCSUB8523_0407Not AvailablePositive381221 - 38151711397.9

Displaying genes 451 – 460 of 1833 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.