Campylobacter subantarcticus R-3023

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter subantarcticus R-3023 is a Gram-negative bacterium characterized by its rod shape and microaerophilic oxygen requirement, meaning it thrives in environments with reduced oxygen levels. It possesses a single replicon, which is indicative of its genetic structure and organization. The strain has been cataloged under the accession number CP007773.1, providing a reference for genomic studies and further research. This bacterium is part of the Campylobacter genus, which is known for its role as a significant pathogen in both humans and animals. While specific pathogenic traits of Campylobacter subantarcticus R-3023 are not detailed in the supplied information, the genus is generally associated with gastrointestinal diseases, often linked to the consumption of contaminated food or water. From an ecological perspective, Campylobacter species are typically found in environments associated with animal feces, particularly in poultry and livestock, which can serve as reservoirs for these bacteria. The microaerophilic nature of C. subantarcticus R-3023 suggests that it may inhabit environments such as the gastrointestinal tracts of animals, where oxygen levels are lower than in the atmosphere. This adaptation allows it to survive in niches that may be inhospitable to other microorganisms. Understanding the ecological role of C. subantarcticus R-3023 could provide insights into the dynamics of microbial communities in subantarctic ecosystems and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter subantarcticus
StrainR-3023

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter subantarcticus R-3023
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter subantarcticus R-3023, Complete Genome

Gene Summary

Adenine Count

652721 bp

Thymine Count

648971 bp

Guanine Count

276236 bp

Cytosine Count

275067 bp

Genome Length

1852995 bp

Protein-coding Genes

1733 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tol-pal system subunit tolrCSUB8523_0199O25754Positive174690 - 17507614524.9
tol-pal system subunit tolaCSUB8523_0200Not AvailablePositive175080 - 17585630111.8
tol-pal system translocation protein tolbCSUB8523_0201Q5HX54Positive175856 - 17705545551.8
tol-pal system peptidoglycan-associated lipoproteinCSUB8523_0202Q51886Positive177124 - 17760917383.3
tol-pal system protein ybgfCSUB8523_0203Not AvailablePositive177621 - 17861037655.2
fkbp-type peptidyl-prolyl cis-trans isomeraseCSUB8523_0204O25748Positive178625 - 17920320460.0
malonyl-coa-[acp] transacylaseCSUB8523_0205P71019Positive179203 - 18012334186.4
multifunctional 5'-methylthioadenosine / s-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolaseCSUB8523_0206Q0PC20Positive180120 - 18080625185.6
adenine nucleotide alpha hydrolase, possible trna 2-thiocytidine biosynthesis proteinCSUB8523_0207B5ED57Positive180803 - 18156428977.9
pyrazinamidase / nicotinamidaseCSUB8523_0208Not AvailablePositive181557 - 18206919348.1

Displaying genes 261 – 270 of 1833 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.