Campylobacter subantarcticus R-3023

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter subantarcticus R-3023 is a Gram-negative bacterium characterized by its rod shape and microaerophilic oxygen requirement, meaning it thrives in environments with reduced oxygen levels. It possesses a single replicon, which is indicative of its genetic structure and organization. The strain has been cataloged under the accession number CP007773.1, providing a reference for genomic studies and further research. This bacterium is part of the Campylobacter genus, which is known for its role as a significant pathogen in both humans and animals. While specific pathogenic traits of Campylobacter subantarcticus R-3023 are not detailed in the supplied information, the genus is generally associated with gastrointestinal diseases, often linked to the consumption of contaminated food or water. From an ecological perspective, Campylobacter species are typically found in environments associated with animal feces, particularly in poultry and livestock, which can serve as reservoirs for these bacteria. The microaerophilic nature of C. subantarcticus R-3023 suggests that it may inhabit environments such as the gastrointestinal tracts of animals, where oxygen levels are lower than in the atmosphere. This adaptation allows it to survive in niches that may be inhospitable to other microorganisms. Understanding the ecological role of C. subantarcticus R-3023 could provide insights into the dynamics of microbial communities in subantarctic ecosystems and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter subantarcticus
StrainR-3023

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter subantarcticus R-3023
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter subantarcticus R-3023, Complete Genome

Gene Summary

Adenine Count

652721 bp

Thymine Count

648971 bp

Guanine Count

276236 bp

Cytosine Count

275067 bp

Genome Length

1852995 bp

Protein-coding Genes

1733 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s11CSUB8523_0097B9KEH4Positive81795 - 8218713853.1
30s ribosomal protein s4CSUB8523_0098B9KEH5Positive82218 - 8284423987.2
dna-directed rna polymerase, alpha subunitCSUB8523_0099A7H5U5Positive82859 - 8387237566.0
50s ribosomal protein l17CSUB8523_0100B9KEH7Positive83876 - 8422913303.3
atp phosphoribosyltransferase, hexameric long formCSUB8523_0101B9KEH8Positive84339 - 8523833449.2
histidinal dehydrogenase / histidinol dehydrogenaseCSUB8523_0102Q5HSJ3Positive85248 - 8652846112.5
imidazoleglycerol-phosphate dehydratase / histidinol-phosphataseCSUB8523_0103A8FNR1Positive86525 - 8759240534.9
type ii restriction endonuclease, dpnii familyCSUB8523_0104P34719Positive87589 - 8842832915.6
dna methyltransferaseCSUB8523_0105P34721Positive88421 - 8926032230.0
imidazole glycerol phosphate synthase hisfh, hish subunitCSUB8523_0106Q9PM75Positive89262 - 8984321584.0

Displaying genes 161 – 170 of 1833 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.