Campylobacter subantarcticus R-3023

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter subantarcticus R-3023 is a Gram-negative bacterium characterized by its rod shape and microaerophilic oxygen requirement, meaning it thrives in environments with reduced oxygen levels. It possesses a single replicon, which is indicative of its genetic structure and organization. The strain has been cataloged under the accession number CP007773.1, providing a reference for genomic studies and further research. This bacterium is part of the Campylobacter genus, which is known for its role as a significant pathogen in both humans and animals. While specific pathogenic traits of Campylobacter subantarcticus R-3023 are not detailed in the supplied information, the genus is generally associated with gastrointestinal diseases, often linked to the consumption of contaminated food or water. From an ecological perspective, Campylobacter species are typically found in environments associated with animal feces, particularly in poultry and livestock, which can serve as reservoirs for these bacteria. The microaerophilic nature of C. subantarcticus R-3023 suggests that it may inhabit environments such as the gastrointestinal tracts of animals, where oxygen levels are lower than in the atmosphere. This adaptation allows it to survive in niches that may be inhospitable to other microorganisms. Understanding the ecological role of C. subantarcticus R-3023 could provide insights into the dynamics of microbial communities in subantarctic ecosystems and their interactions with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter subantarcticus
StrainR-3023

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter subantarcticus R-3023
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter subantarcticus R-3023, Complete Genome

Gene Summary

Adenine Count

652721 bp

Thymine Count

648971 bp

Guanine Count

276236 bp

Cytosine Count

275067 bp

Genome Length

1852995 bp

Protein-coding Genes

1733 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytolethal distending toxin, subunit cdtcCSUB8523_1659Not AvailableNegative1629973 - 163053620967.4
cytolethal distending toxin, subunit cdtbCSUB8523_1660Q46669Negative1630546 - 163134629658.0
cytolethal distending toxin, subunit cdtaCSUB8523_1661Q0PC56Negative1631343 - 163212829132.2
peptidase tCSUB8523_1662Q92VT5Positive1632254 - 163348646288.6
putative anaerobic c4-dicarboxylate transporter, dcuc familyCSUB8523_1663P44018Negative1633504 - 163479645485.0
(alpha)-aspartyl dipeptidaseCSUB8523_1664A3N0N1Negative1634806 - 163551026556.1
broad specificity 5'(3')-nucleotidase and polyphosphataseCSUB8523_1665B9KDQ8Positive1635619 - 163639228944.4
dinucleotide-utilizing enzyme, molybdopterin/thiamine biosynthesis family 1CSUB8523_1666O32037Positive1636385 - 163703824196.1
class d beta-lactamaseCSUB8523_1667B3U538Positive1637100 - 163785229291.7
aspartate 1-decarboxylaseCSUB8523_1668A8FK85Negative1637835 - 163822114216.2

Displaying genes 1611 – 1620 of 1833 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.