Pseudomonas anuradhapurensis RD8MR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas anuradhapurensis RD8MR3 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and regulation. The strain is associated with the accession number CP077097.1, which provides a reference for its genetic information and supports further research into its biological functions and potential applications. The traits of Pseudomonas anuradhapurensis RD8MR3 suggest it may play a significant role in various ecological niches. Pseudomonas species are known for their versatility and adaptability, often thriving in diverse environments. This adaptability may be linked to the strain's genomic traits, allowing it to respond effectively to environmental changes. Furthermore, the single replicon structure could suggest a specialized evolutionary strategy, enabling the organism to optimize its resources and metabolic pathways. This characteristic may be advantageous in competitive environments, where efficient growth and resource utilization are crucial for survival. In terms of ecological impact, Pseudomonas species are often involved in biogeochemical cycles and can contribute to soil health and nutrient cycling. The specific traits of Pseudomonas anuradhapurensis RD8MR3 imply that it may have potential applications in bioremediation or agriculture, although further studies would be needed to establish its specific roles and capabilities in these areas. Overall, the genomic traits of Pseudomonas anuradhapurensis RD8MR3 underline its potential significance in both ecological contexts and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas anuradhapurensis
StrainRD8MR3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas anuradhapurensis RD8MR3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas anuradhapurensis RD8MR3, Complete Genome

Gene Summary

Adenine Count

988425 bp

Thymine Count

984063 bp

Guanine Count

1709075 bp

Cytosine Count

1712073 bp

Genome Length

5393636 bp

Protein-coding Genes

4754 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sterol desaturase family proteinHU763_019200P57022Negative4192224 - 419318234743.1
gtra family proteinHU763_019205Q9T1D7Negative4193167 - 419353513611.8
amino acid permeaseHU763_019210O34618Negative4193725 - 419514050748.5
transglycosylase domain-containing proteinHU763_019215Not AvailablePositive4195532 - 4198681117042.0
padr family transcriptional regulatorHU763_019220P64588Positive4198770 - 419931520152.0
siderophore-interacting proteinHU763_019225Q46871Positive4199308 - 420006628062.6
pr6pr family membrane proteinHU763_019230Not AvailableNegative4200123 - 420076423928.6
vf530 family proteinHU763_019235Q5E7H1Negative4200766 - 42009878495.25
tonb-dependent receptorHU763_019240Q9JZN9Positive4201153 - 420320174472.9
carbohydrate porinHU763_019245Q51485Positive4203421 - 420475549160.2

Displaying genes 3841 – 3850 of 4928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.