Pseudomonas anuradhapurensis RD8MR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas anuradhapurensis RD8MR3 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and regulation. The strain is associated with the accession number CP077097.1, which provides a reference for its genetic information and supports further research into its biological functions and potential applications. The traits of Pseudomonas anuradhapurensis RD8MR3 suggest it may play a significant role in various ecological niches. Pseudomonas species are known for their versatility and adaptability, often thriving in diverse environments. This adaptability may be linked to the strain's genomic traits, allowing it to respond effectively to environmental changes. Furthermore, the single replicon structure could suggest a specialized evolutionary strategy, enabling the organism to optimize its resources and metabolic pathways. This characteristic may be advantageous in competitive environments, where efficient growth and resource utilization are crucial for survival. In terms of ecological impact, Pseudomonas species are often involved in biogeochemical cycles and can contribute to soil health and nutrient cycling. The specific traits of Pseudomonas anuradhapurensis RD8MR3 imply that it may have potential applications in bioremediation or agriculture, although further studies would be needed to establish its specific roles and capabilities in these areas. Overall, the genomic traits of Pseudomonas anuradhapurensis RD8MR3 underline its potential significance in both ecological contexts and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas anuradhapurensis
StrainRD8MR3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas anuradhapurensis RD8MR3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas anuradhapurensis RD8MR3, Complete Genome

Gene Summary

Adenine Count

988425 bp

Thymine Count

984063 bp

Guanine Count

1709075 bp

Cytosine Count

1712073 bp

Genome Length

5393636 bp

Protein-coding Genes

4754 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidative damage protection proteinHU763_001320A5VX68Negative292549 - 29282110598.6
a/g-specific adenine glycosylaseHU763_001325Q05869Negative292818 - 29388539882.9
asma family proteinHU763_001330P28249Negative293882 - 29611979943.7
ofa family mfs transporterHU763_001335A0LNN5Positive296504 - 29816558584.6
imidazoleglycerol-phosphate dehydratase hisbHU763_001340A5VX72Positive298464 - 29905721944.4
imidazole glycerol phosphate synthase subunit hishHU763_001345Q88R44Positive299058 - 29969623544.0
duf2164 domain-containing proteinHU763_001350Not AvailablePositive299697 - 2999579935.83
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseHU763_001355B0KI44Positive299985 - 30072225826.2
imidazole glycerol phosphate synthase subunit hisfHU763_001360A5VX76Positive300733 - 30150327119.5
choline abc transporter atp-binding proteinHU763_001365P14175Negative301639 - 30281743653.4

Displaying genes 361 – 370 of 4928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.