Pseudomonas anuradhapurensis RD8MR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas anuradhapurensis RD8MR3 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and regulation. The strain is associated with the accession number CP077097.1, which provides a reference for its genetic information and supports further research into its biological functions and potential applications. The traits of Pseudomonas anuradhapurensis RD8MR3 suggest it may play a significant role in various ecological niches. Pseudomonas species are known for their versatility and adaptability, often thriving in diverse environments. This adaptability may be linked to the strain's genomic traits, allowing it to respond effectively to environmental changes. Furthermore, the single replicon structure could suggest a specialized evolutionary strategy, enabling the organism to optimize its resources and metabolic pathways. This characteristic may be advantageous in competitive environments, where efficient growth and resource utilization are crucial for survival. In terms of ecological impact, Pseudomonas species are often involved in biogeochemical cycles and can contribute to soil health and nutrient cycling. The specific traits of Pseudomonas anuradhapurensis RD8MR3 imply that it may have potential applications in bioremediation or agriculture, although further studies would be needed to establish its specific roles and capabilities in these areas. Overall, the genomic traits of Pseudomonas anuradhapurensis RD8MR3 underline its potential significance in both ecological contexts and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas anuradhapurensis
StrainRD8MR3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas anuradhapurensis RD8MR3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas anuradhapurensis RD8MR3, Complete Genome

Gene Summary

Adenine Count

988425 bp

Thymine Count

984063 bp

Guanine Count

1709075 bp

Cytosine Count

1712073 bp

Genome Length

5393636 bp

Protein-coding Genes

4754 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3300 domain-containing proteinHU763_013150P36682Negative2837192 - 283865552404.1
vit1/ccc1 transporter family proteinHU763_013155Not AvailableNegative2838827 - 283948623552.4
hypothetical proteinHU763_013160Not AvailablePositive2839616 - 28398678997.53
torf family putative porinHU763_013165Not AvailablePositive2839949 - 284066825744.4
dmt family transporterHU763_013170P29370Negative2840665 - 284153730117.1
rida family proteinHU763_013175P39332Negative2841646 - 284205614604.5
pld nuclease n-terminal domain-containing proteinHU763_013180Not AvailableNegative2842157 - 28423698239.43
fad/fmn-containing dehydrogenaseHU763_013185Not AvailableNegative2842475 - 284294517249.0
glxa family transcriptional regulatorHU763_013190A0A0H2ZIC3Positive2843106 - 284411337186.9
tetr family transcriptional regulatorHU763_013195Q88FX7Negative2844144 - 284481525643.8

Displaying genes 2631 – 2640 of 4928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.