Pseudomonas anuradhapurensis RD8MR3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas anuradhapurensis RD8MR3 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and regulation. The strain is associated with the accession number CP077097.1, which provides a reference for its genetic information and supports further research into its biological functions and potential applications. The traits of Pseudomonas anuradhapurensis RD8MR3 suggest it may play a significant role in various ecological niches. Pseudomonas species are known for their versatility and adaptability, often thriving in diverse environments. This adaptability may be linked to the strain's genomic traits, allowing it to respond effectively to environmental changes. Furthermore, the single replicon structure could suggest a specialized evolutionary strategy, enabling the organism to optimize its resources and metabolic pathways. This characteristic may be advantageous in competitive environments, where efficient growth and resource utilization are crucial for survival. In terms of ecological impact, Pseudomonas species are often involved in biogeochemical cycles and can contribute to soil health and nutrient cycling. The specific traits of Pseudomonas anuradhapurensis RD8MR3 imply that it may have potential applications in bioremediation or agriculture, although further studies would be needed to establish its specific roles and capabilities in these areas. Overall, the genomic traits of Pseudomonas anuradhapurensis RD8MR3 underline its potential significance in both ecological contexts and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas anuradhapurensis
StrainRD8MR3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas anuradhapurensis RD8MR3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas anuradhapurensis RD8MR3, Complete Genome

Gene Summary

Adenine Count

988425 bp

Thymine Count

984063 bp

Guanine Count

1709075 bp

Cytosine Count

1712073 bp

Genome Length

5393636 bp

Protein-coding Genes

4754 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate porinHU763_005125Q51485Positive1107340 - 110868349645.8
d-hexose-6-phosphate mutarotaseHU763_005130P39173Positive1108800 - 110965432585.5
dna-binding transcriptional regulator hexrHU763_005135Q88P32Negative1109647 - 111051031337.8
glucose-6-phosphate dehydrogenaseHU763_005140O68282Positive1110722 - 111219155087.0
6-phosphogluconolactonaseHU763_005145Q9EV79Positive1112178 - 111289125131.4
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseHU763_005150P00885Positive1112909 - 111358924071.4
2-isopropylmalate synthaseHU763_005155Q88P28Negative1113828 - 111550161727.0
peptidoglycan dd-metalloendopeptidase family proteinHU763_005160P0AFT0Negative1115933 - 111676029603.9
exodeoxyribonuclease vii large subunitHU763_005165Q88P26Negative1116764 - 111814351219.1
lysr family transcriptional regulatorHU763_005170Q05840Negative1118280 - 111915831671.6

Displaying genes 1121 – 1130 of 4928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.