Escherichia coli Crooks, Crookes

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli Crooks, Crookes is a Gram-negative, rod-shaped bacterium that possesses flagella, allowing for motility. This species thrives optimally at 37°C, placing it within a mesophilic temperature range, which is characteristic of many bacteria that inhabit warm-blooded hosts, including humans. E. coli Crooks, Crookes is noted for its free-living biotic relationship, indicating that it does not rely on a host organism for survival. This trait is significant as it suggests a versatile ecological role, potentially contributing to nutrient cycling in various environments. The organism has multiple replicons, specifically five, which may play a role in its genetic diversity and adaptability. This genetic characteristic can provide insights into the evolutionary mechanisms that allow E. coli to thrive in different ecological niches and respond to environmental stresses. The available genomic accessions for E. coli Crooks, Crookes—CP043852.1, CP043851.1, CP022959.1, CP000946.1, and CP033020.1—indicate a rich source of genetic information that could facilitate further research into its biology, ecology, and potential applications in biotechnology. In conclusion, the traits of E. coli Crooks, Crookes, including its Gram-negative status, rod shape, flagella presence, optimal temperature, and free-living nature, highlight its role in microbial ecosystems and its potential for further study in diverse biological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainCrooks, Crookes

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia coli Crooks, Crookes
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli Crooks, Crookes, Complete Genome

Gene Summary

Adenine Count

1185288 bp

Thymine Count

1181229 bp

Guanine Count

1215742 bp

Cytosine Count

1222053 bp

Genome Length

4804312 bp

Protein-coding Genes

4380 genes

Non-Coding Genes

276 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2002 family proteinF1719_12645P0AD55Negative2441785 - 244212913066.5
duf883 domain-containing proteinF1719_12650P0ADQ9Positive2442281 - 244261011847.9
glutaredoxin-like protein nrdhF1719_12655P0AC67Positive2442858 - 24431039139.98
class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdiF1719_12660P0A774Positive2443100 - 244351015341.3
class 1b ribonucleoside-diphosphate reductase subunit alphaF1719_12665P39452Positive2443483 - 244562780423.5
ribonucleoside-diphosphate reductase 2 subunit betaF1719_12670P37146Positive2445637 - 244659636445.1
proline/glycine betaine abc transporter atp-binding protein provF1719_12675P14175Positive2446950 - 244815244165.5
glycine betaine/l-proline abc transporter permease prowF1719_12680P14176Positive2448145 - 244920937622.1
glycine betaine/l-proline abc transporter substrate-binding protein proxF1719_12685P0AFM3Positive2449267 - 245025936047.4
hypothetical proteinF1719_12690Not AvailableNegative2450291 - 24504857194.91

Displaying genes 2441 – 2450 of 18552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.