Micromonospora sagamiensis MK-65

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora sagamiensis MK-65 is a Gram-positive actinobacterium characterized by its presence in diverse habitats, including aquatic environments, soil, and nodules associated with specific plant hosts. This bacterium is distinguished by having true flagella, which may facilitate motility in its aquatic habitats. The strain is associated with the plants Lathyrus and Lupinus, indicating its potential role in symbiotic relationships, particularly in nitrogen fixation processes that benefit these leguminous hosts. With a single replicon, M. sagamiensis MK-65 may exhibit a streamlined genomic organization, which can be advantageous for adaptability and survival in varying environmental conditions. The accession number for this strain is AP023438.1, providing a reference for further genomic and phylogenetic studies. Understanding the ecological roles of Micromonospora sagamiensis MK-65 in its habitats and its interactions with plant hosts can offer insights into the dynamics of microbial communities in soil and aquatic systems. Such knowledge may contribute to the broader understanding of microbial ecology, especially concerning plant-microbe interactions that enhance soil fertility and plant growth.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sagamiensis
StrainMK-65

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic habitats; nodules; soil
Biotic relationshipNot Available
Host(s)Lathyrus, Lupinus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora sagamiensis MK-65, Complete Genome

Gene Summary

Adenine Count

946905 bp

Thymine Count

957593 bp

Guanine Count

2511754 bp

Cytosine Count

2514484 bp

Genome Length

6930736 bp

Protein-coding Genes

5896 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase principal sigma factor hrddGCM10017556_13000Q59914Negative1542427 - 154342837290.2
n-acetylmuramic acid 6-phosphate etheraseGCM10017556_13010Q47U25Negative1543808 - 154474332402.8
rpir family transcriptional regulatorGCM10017556_13020Q8RD36Negative1544740 - 154563631490.5
reductaseGCM10017556_13030E5F146Negative1545782 - 154678935349.8
short-chain dehydrogenaseGCM10017556_13040Q56840Positive1546993 - 154767022496.8
thymidylate kinaseGCM10017556_13050A1WSY9Negative1547714 - 154843926677.4
hypothetical proteinGCM10017556_13060Not AvailablePositive1548591 - 154917521732.8
hypothetical proteinGCM10017556_13070Not AvailablePositive1549172 - 154944710162.9
hypothetical proteinGCM10017556_13080Not AvailablePositive1549461 - 155018325179.9
hypothetical proteinGCM10017556_13090Not AvailablePositive1550225 - 15503685032.7

Displaying genes 1311 – 1320 of 5974 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.