Filimonas lacunae YT21

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Filimonas

Description

Filimonas lacunae YT21 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic data for this organism is documented under the accession number AP017422.1, providing a reference point for further genetic studies and comparative analyses within the genus Filimonas. As a member of the microbial community, Filimonas lacunae YT21 may play a significant role in its ecosystem, particularly in the processes of nutrient cycling and organic matter decomposition. The possession of a single replicon suggests a potentially efficient replication and maintenance of its genetic material, which could be advantageous for survival in fluctuating environmental conditions. Understanding the genetic makeup of Filimonas lacunae YT21 through its accession number allows researchers to explore its physiological traits, metabolic pathways, and interactions with other microorganisms. This information could enhance our comprehension of its ecological niche and its contributions to microbial diversity and function in its habitat. Further studies could illuminate its role in the microbiome, particularly in aquatic environments where members of the Filimonas genus are often isolated. In summary, Filimonas lacunae YT21, with its single replicon and defined genomic accessions, presents an interesting candidate for ecological and microbiological research, potentially influencing nutrient dynamics in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusFilimonas
SpeciesFilimonas lacunae
StrainYT21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Filimonas lacunae YT21, Complete Genome

Gene Summary

Adenine Count

2183771 bp

Thymine Count

2188602 bp

Guanine Count

1725826 bp

Cytosine Count

1716206 bp

Genome Length

7814405 bp

Protein-coding Genes

6357 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane assembly proteinFLA_6030Not AvailablePositive7308686 - 7311769113169.0
hypothetical proteinFLA_6031Not AvailableNegative7312377 - 73125145117.2
5-methyltetrahydrofolate--homocysteine methyltransferaseFLA_6032Q9I2Q2Negative7312600 - 7315302100070.0
5-methyltetrahydrofolate--homocysteine methyltransferaseFLA_6033O33465Negative7315340 - 731636837552.5
recombination protein recrFLA_6034Q8A8T6Negative7316561 - 731718122949.7
hypothetical proteinFLA_6035Not AvailableNegative7317219 - 731880858769.7
atp-dependent dna helicase uvrd/pcraFLA_6036Q5HN29Negative7318825 - 7321974121588.0
peptidyl-prolyl cis-trans isomerase ppia precursorFLA_6037P20753Positive7322037 - 732262421394.4
crp/fnr family transcriptional regulatorFLA_6038Not AvailablePositive7322621 - 732321423004.7
hypothetical proteinFLA_6039Not AvailablePositive7323289 - 732365714083.5

Displaying genes 6031 – 6040 of 6448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.