Filimonas lacunae YT21

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Filimonas

Description

Filimonas lacunae YT21 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic data for this organism is documented under the accession number AP017422.1, providing a reference point for further genetic studies and comparative analyses within the genus Filimonas. As a member of the microbial community, Filimonas lacunae YT21 may play a significant role in its ecosystem, particularly in the processes of nutrient cycling and organic matter decomposition. The possession of a single replicon suggests a potentially efficient replication and maintenance of its genetic material, which could be advantageous for survival in fluctuating environmental conditions. Understanding the genetic makeup of Filimonas lacunae YT21 through its accession number allows researchers to explore its physiological traits, metabolic pathways, and interactions with other microorganisms. This information could enhance our comprehension of its ecological niche and its contributions to microbial diversity and function in its habitat. Further studies could illuminate its role in the microbiome, particularly in aquatic environments where members of the Filimonas genus are often isolated. In summary, Filimonas lacunae YT21, with its single replicon and defined genomic accessions, presents an interesting candidate for ecological and microbiological research, potentially influencing nutrient dynamics in its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusFilimonas
SpeciesFilimonas lacunae
StrainYT21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Filimonas lacunae YT21, Complete Genome

Gene Summary

Adenine Count

2183771 bp

Thymine Count

2188602 bp

Guanine Count

1725826 bp

Cytosine Count

1716206 bp

Genome Length

7814405 bp

Protein-coding Genes

6357 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidaseFLA_5400A9AJC5Negative6632861 - 663353825295.7
dna-3-methyladenine glycosylase iiFLA_5401Q92383Positive6633571 - 663416422884.2
hypothetical proteinFLA_5402Not AvailableNegative6634229 - 663465415163.2
gtp-binding protein obgFLA_5403Q11Z03Negative6634952 - 663586632892.1
phenylacetic acid degradation protein paayFLA_5404C4ZPW1Negative6635963 - 663656521965.6
enoyl-coa hydrataseFLA_5405P77467Negative6636582 - 663736127678.5
phenylacetate-coa oxygenase, paaj subunitFLA_5406P76080Negative6637407 - 663791619336.2
phenylacetate-coa oxygenase, paai subunitFLA_5407P76079Negative6637931 - 663873130375.0
phenylacetate-coa oxygenase, paah subunitFLA_5408P76078Negative6638771 - 663907611625.5
phenylacetate-coa oxygenase, paag subunitFLA_5409P76077Negative6639093 - 664004336406.2

Displaying genes 5401 – 5410 of 6448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.