Shewanella basaltis J83

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella basaltis J83 is a notable bacterium characterized by the presence of flagella, which facilitates its mobility in various environments. This motility can be crucial for its survival and adaptability, allowing it to navigate toward favorable conditions or away from harmful ones. The organism is genetically distinct, possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its efficiency in replication and adaptation. The genome of Shewanella basaltis J83 is cataloged under the accession number CP182944.1, providing a reference for researchers studying its genetic characteristics and potential applications. Given its capabilities and genetic makeup, Shewanella basaltis J83 may play a significant role in biogeochemical processes. Shewanella species are known for their versatility in utilizing various electron acceptors, suggesting that S. basaltis J83 could be involved in the reduction of metals or organic compounds in its environment. This trait positions it as a potential candidate for bioremediation applications, particularly in environments contaminated with heavy metals or other pollutants. In summary, the combination of flagellar motility and a single replicon in Shewanella basaltis J83 indicates a well-adapted organism capable of thriving in diverse ecological niches, potentially contributing to important environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella basaltis
StrainJ83

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella basaltis J83, Complete Genome

Gene Summary

Adenine Count

1313638 bp

Thymine Count

1302525 bp

Guanine Count

976415 bp

Cytosine Count

969746 bp

Genome Length

4562324 bp

Protein-coding Genes

3785 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypc/hybg/hupf family hydrogenase formation chaperoneACNH6B_08895Q7VJB9Negative2038120 - 20383598937.91
hydrogenase nickel incorporation protein hypbACNH6B_08900Q7VJB8Negative2038362 - 203909927317.4
carbamoyltransferase hypfACNH6B_08905Q55638Negative2039263 - 204164187729.6
nife hydrogenaseACNH6B_08910Not AvailableNegative2041682 - 204356570399.6
hyad/hybd family hydrogenase maturation endopeptidaseACNH6B_08915P31876Negative2043552 - 204410620294.5
ni/fe-hydrogenase, b-type cytochrome subunitACNH6B_08920P31875Negative2044112 - 204477725444.4
nickel-dependent hydrogenase large subunitACNH6B_08925P31883Negative2044808 - 204651162345.9
nickel-dependent hydrogenase small subunitACNH6B_08930P31884Negative2046514 - 204765041037.0
mechanosensitive ion channel family proteinACNH6B_08935O07594Positive2048188 - 204903332119.5
recx family transcriptional regulatorACNH6B_08940Q6LH46Negative2049062 - 204987431057.9

Displaying genes 1781 – 1790 of 3955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.