Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | AMJAP_1369 | P0AFU8 | Negative | 1566753 - 1567364 | 22232.7 |
| epimerase | AMJAP_1370 | P77775 | Positive | 1567437 - 1568348 | 33502.4 |
| conserved hypothetical protein | AMJAP_1371 | Not Available | Negative | 1568362 - 1570083 | 63488.2 |
| glutamate dehydrogenase | AMJAP_1372 | Q9HZE0 | Positive | 1570286 - 1575100 | 182634.0 |
| conserved hypothetical protein | AMJAP_1373 | Not Available | Positive | 1575159 - 1575377 | 8335.02 |
| dihydroorotate dehydrogenase (fumarate) | AMJAP_1374 | Q3KFC7 | Positive | 1575442 - 1576473 | 36423.0 |
| ribosome modulation factor | AMJAP_1375 | Q1QXW0 | Negative | 1576581 - 1576787 | 7750.06 |
| 23s rrna (guanine2445-n2)-methyltransferase/23s rrna (guanine2069-n7)-methyltransferase | AMJAP_1376 | A5W6K7 | Positive | 1577256 - 1579460 | 83319.6 |
| ammonium transporter, amt family | AMJAP_1377 | Q58739 | Positive | 1579794 - 1581002 | 42663.5 |
| citrate synthase | AMJAP_1378 | P14165 | Negative | 1581734 - 1583014 | 47571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
