Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucuronate 4-epimerase | AMJAP_0846 | Q04871 | Positive | 958480 - 959487 | 37645.6 |
| rna-metabolising metallo-beta-lactamase | AMJAP_0847 | Q5SLP1 | Positive | 960000 - 961403 | 52356.9 |
| conserved hypothetical protein | AMJAP_0848 | Not Available | Positive | 961534 - 961965 | 15984.3 |
| conserved hypothetical protein | AMJAP_0849 | Not Available | Negative | 962398 - 963801 | 51425.4 |
| conserved hypothetical protein | AMJAP_0850 | Not Available | Negative | 963880 - 964389 | 16878.2 |
| colanic acid biosysnthesis udp-glucose lipid carrier transferase | AMJAP_0851 | Q56770 | Positive | 964596 - 966086 | 56441.4 |
| conserved hypothetical protein | AMJAP_0852 | B7UNB3 | Positive | 966316 - 967092 | 29087.8 |
| glycosyl transferase family 1 | AMJAP_0853 | Q58459 | Positive | 967053 - 968213 | 43234.4 |
| glycosyl transferase family 1 | AMJAP_0854 | Q9R9N1 | Positive | 968210 - 969298 | 40148.6 |
| hypothetical protein | AMJAP_0855 | Q02729 | Positive | 969282 - 970613 | 51042.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
