Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-fucosyltransferase | AMJAP_0622 | Q58YV9 | Positive | 696478 - 697341 | 33011.4 |
| udp-glucose 4-epimerase | AMJAP_0623 | Q57664 | Positive | 697391 - 698314 | 33588.4 |
| glycosyl transferase family 2 | AMJAP_0624 | P71054 | Positive | 698344 - 699243 | 34335.4 |
| glycosyl transferase family 2 | AMJAP_0625 | Q48214 | Positive | 699285 - 700061 | 29321.7 |
| glycosyl transferase | AMJAP_0626 | P36667 | Positive | 700192 - 700968 | 30131.7 |
| udp-glucose 4-epimerase | AMJAP_0627 | Q56623 | Positive | 700965 - 701912 | 35049.6 |
| sugar transferase | AMJAP_0628 | Q57491 | Positive | 701917 - 702465 | 20766.9 |
| nucleotide sugar epimerase/dehydratase wbpm | AMJAP_0629 | P39853 | Positive | 702495 - 704414 | 71130.9 |
| Trna-met | Not Available | Not Available | Positive | 704961 - 705037 | Not Available |
| rna polymerase primary sigma factor | AMJAP_0630 | P26480 | Negative | 705216 - 707039 | 68875.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
