Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa synthetase | AMJAP_0562 | A1U2S9 | Positive | 632702 - 634651 | 71935.7 |
| luxr family transcriptional regulator | AMJAP_0563 | A8R3T0 | Positive | 634840 - 635505 | 23631.4 |
| conserved hypothetical protein | AMJAP_0564 | P76176 | Negative | 635566 - 636336 | 28100.5 |
| two-component system sensor histidine kinase and response regulator | AMJAP_0565 | Q8D5Z6 | Negative | 636333 - 640274 | 146147.0 |
| rna polymerase subunit sigma-32 | AMJAP_0566 | Not Available | Positive | 640552 - 640809 | 9817.81 |
| cation/acetate symporter | AMJAP_0567 | P31640 | Positive | 640841 - 642649 | 63678.3 |
| cbs domain-containing protein | AMJAP_0568 | P54606 | Positive | 642817 - 644646 | 68172.8 |
| dna polymerase iii subunit epsilon | AMJAP_0569 | Q8RA32 | Positive | 644655 - 645281 | 23687.0 |
| flagellar hook-basal body complex protein flie | AMJAP_0570 | A1U260 | Positive | 645448 - 645807 | 13125.8 |
| flagellar m-ring protein flif | AMJAP_0571 | Q51463 | Positive | 645863 - 647560 | 61584.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
