Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide transport system atp-binding protein | AMJAP_0507 | P24586 | Positive | 557529 - 558215 | 25054.1 |
| capsular polysaccharide transport system permease protein | AMJAP_0508 | P42501 | Positive | 558271 - 559356 | 39893.1 |
| dtdp-glucose 4,6-dehydratase | AMJAP_0509 | P55294 | Positive | 559402 - 560505 | 41691.1 |
| dtdp-4-dehydrorhamnose reductase | AMJAP_0510 | P26392 | Positive | 560502 - 561398 | 33050.0 |
| glucose-1-phosphate thymidylyltransferase | AMJAP_0511 | P61887 | Positive | 561402 - 562289 | 33030.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | AMJAP_0512 | Q9HU21 | Positive | 562286 - 562834 | 20694.3 |
| glycosyl transferase family 2 | AMJAP_0513 | P55465 | Positive | 563769 - 566030 | 86674.2 |
| conserved hypothetical protein | AMJAP_0514 | Not Available | Positive | 566155 - 567066 | 34999.4 |
| capsular polysaccharide export protein | AMJAP_0515 | Q05013 | Positive | 567063 - 569057 | 74359.2 |
| capsular polysaccharide export protein | AMJAP_0516 | P25970 | Positive | 569205 - 570017 | 29212.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
