Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein nlpd | AMJAP_0497 | P45682 | Positive | 543042 - 543923 | 31800.5 |
| rna polymerase nonessential primary-like sigma factor | AMJAP_0498 | P45684 | Positive | 543993 - 544985 | 37474.7 |
| dna mismatch repair protein muts | AMJAP_0499 | C1DSR1 | Negative | 545053 - 547593 | 93802.2 |
| glycosyl transferase family 2 | AMJAP_0500 | Q50864 | Positive | 548338 - 550974 | 99356.6 |
| conserved hypothetical protein | AMJAP_0501 | O29937 | Positive | 550998 - 551732 | 27748.3 |
| conserved hypothetical protein | AMJAP_0502 | Not Available | Positive | 551832 - 552800 | 37184.4 |
| hypothetical protein | AMJAP_0503 | Not Available | Positive | 552982 - 554379 | 53133.8 |
| hypothetical protein | AMJAP_0504 | Not Available | Positive | 554528 - 554893 | 12938.9 |
| polysaccharide export protein | AMJAP_0505 | Q03961 | Positive | 554960 - 556672 | 62102.1 |
| capsular polysaccharide transport system permease protein | AMJAP_0506 | P23889 | Positive | 556738 - 557532 | 30290.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
