Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine1915-n3)-methyltransferase | AMJAP_0417 | A6VZ82 | Positive | 456211 - 456678 | 17158.8 |
| penicillin-binding protein 2 | AMJAP_0418 | P0AD67 | Positive | 456706 - 458631 | 70932.8 |
| rod shape determining protein roda | AMJAP_0419 | P0ABG8 | Positive | 458632 - 459768 | 41055.0 |
| membrane-bound lytic murein transglycosylase b | AMJAP_0420 | P41052 | Positive | 459965 - 460972 | 37790.1 |
| rare lipoprotein a | AMJAP_0421 | Q9KTF4 | Positive | 460976 - 461818 | 29870.0 |
| d-alanyl-d-alanine carboxypeptidase | AMJAP_0422 | P08506 | Positive | 461927 - 463081 | 42382.5 |
| d-alanine transaminase | AMJAP_0423 | P54692 | Positive | 463154 - 464005 | 31514.8 |
| conserved hypothetical protein | AMJAP_0424 | A6V0B2 | Positive | 464022 - 464303 | 10246.3 |
| lipoyl(octanoyl) transferase | AMJAP_0425 | A4VQZ7 | Positive | 464333 - 464992 | 24502.6 |
| lipoic acid synthetase | AMJAP_0426 | Q2SA38 | Positive | 464982 - 466016 | 38520.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
