Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsbc | AMJAP_0387 | P0AEG7 | Positive | 422096 - 422821 | 25826.2 |
| homoserine dehydrogenase | AMJAP_0388 | P29365 | Positive | 422999 - 424294 | 46421.9 |
| threonine synthase | AMJAP_0389 | P29363 | Positive | 424323 - 425717 | 51529.5 |
| conserved hypothetical protein | AMJAP_0390 | P0AB02 | Positive | 425790 - 426599 | 30252.4 |
| single-stranded-dna-specific exonuclease | AMJAP_0391 | P28355 | Positive | 426592 - 428325 | 63208.7 |
| conserved hypothetical protein | AMJAP_0392 | Not Available | Positive | 428369 - 428551 | 6533.64 |
| deoxyribonuclease iv | AMJAP_0393 | A4WCJ5 | Positive | 428548 - 429414 | 32331.2 |
| type vi secretion system secreted protein vgrg | AMJAP_0394 | Q9HU93 | Positive | 429513 - 431918 | 89810.7 |
| conserved hypothetical protein | AMJAP_0395 | P55939 | Positive | 431915 - 434092 | 84348.9 |
| conserved hypothetical protein | AMJAP_0396 | Not Available | Positive | 434085 - 434978 | 34383.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
