Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | AMJAP_0308 | A1TYW3 | Positive | 345780 - 346844 | 39388.4 |
| carbonic anhydrase | AMJAP_0309 | P61517 | Positive | 346871 - 347638 | 29377.1 |
| o-acetylhomoserine (thiol)-lyase | AMJAP_0310 | Q9WZY4 | Negative | 347708 - 348982 | 45625.2 |
| dna repair protein rada/sms | AMJAP_0311 | P24554 | Positive | 349143 - 350516 | 48988.1 |
| type iv pilus assembly pilz | AMJAP_0312 | Q9HVI1 | Negative | 350517 - 350879 | 13777.5 |
| heme abc transporter atp-binding protein | AMJAP_0313 | P45127 | Negative | 351041 - 352702 | 62149.8 |
| glycine hydroxymethyltransferase | AMJAP_0314 | Q2S9R4 | Positive | 353052 - 354308 | 45833.4 |
| transcriptional repressor nrdr | AMJAP_0315 | C1DLH3 | Positive | 354481 - 354957 | 18454.0 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase | AMJAP_0316 | P25539 | Positive | 354963 - 356087 | 40625.4 |
| riboflavin synthase | AMJAP_0317 | P51961 | Positive | 356087 - 356764 | 24009.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
