Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilm | AMJAP_0298 | G3XD28 | Positive | 331422 - 332510 | 38887.4 |
| type iv pilus assembly protein piln | AMJAP_0299 | G3XD30 | Positive | 332516 - 333064 | 20806.2 |
| type iv pilus assembly protein pilo | AMJAP_0300 | G3XD51 | Positive | 333066 - 333668 | 22086.7 |
| type iv pilus assembly protein pilp | AMJAP_0301 | G3XCX7 | Positive | 333652 - 334200 | 20468.6 |
| type iv pilus assembly protein pilq | AMJAP_0302 | P34750 | Positive | 334200 - 336311 | 76192.2 |
| shikimate kinase | AMJAP_0303 | Q5X6H1 | Positive | 336322 - 336840 | 19204.0 |
| 3-dehydroquinate synthase | AMJAP_0304 | C5BRJ7 | Positive | 336855 - 337931 | 38937.8 |
| damx protein | AMJAP_0305 | P45459 | Positive | 337944 - 339512 | 56715.1 |
| glutamate synthase (nadph/nadh) large chain | AMJAP_0306 | E1V8I1 | Positive | 339687 - 344141 | 162169.0 |
| glutamate synthase (nadph/nadh) small chain | AMJAP_0307 | E1V8I0 | Positive | 344214 - 345635 | 52273.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
