Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate transporter | AMJAP_0102 | P72958 | Positive | 117298 - 119136 | 65214.0 |
| trap dicarboxylate transporter dctp subunit | AMJAP_0103 | Q8KR68 | Negative | 119535 - 120560 | 37011.8 |
| glycolate oxidase iron-sulfur subunit | AMJAP_0104 | P52074 | Negative | 120623 - 121846 | 44946.3 |
| glycolate oxidase fad binding subunit | AMJAP_0105 | P52073 | Negative | 121875 - 122987 | 40054.9 |
| glycolate oxidase | AMJAP_0106 | P0AEQ0 | Negative | 122990 - 124474 | 53317.4 |
| conserved hypothetical protein | AMJAP_0107 | A0A084AFG6 | Negative | 124633 - 125604 | 36650.6 |
| lysr family transcriptional regulator | AMJAP_0108 | Q08597 | Positive | 125814 - 126740 | 34040.6 |
| conserved hypothetical protein | AMJAP_0109 | Not Available | Positive | 127059 - 127544 | 17711.8 |
| glyoxalase/bleomycin resistance protein | AMJAP_0110 | Not Available | Negative | 127869 - 128249 | 13190.4 |
| metal dependent phosphohydrolase | AMJAP_0111 | Q9VAM9 | Positive | 128709 - 129272 | 21414.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
