Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis lauroyl acyltransferase | AMJAP_0024 | P0ACV1 | Positive | 29565 - 30383 | 30780.6 |
| trk system potassium uptake protein trkh | AMJAP_0025 | E1V6C5 | Negative | 30449 - 31897 | 52904.6 |
| trk system potassium uptake protein trka | AMJAP_0026 | E1V6C6 | Negative | 31910 - 33286 | 50278.9 |
| 16s rrna (cytosine967-c5)-methyltransferase | AMJAP_0027 | Q88RR3 | Negative | 33327 - 34625 | 49191.8 |
| methionyl-trna formyltransferase | AMJAP_0028 | C5BF18 | Negative | 34625 - 35593 | 34237.3 |
| peptide deformylase | AMJAP_0029 | B3PGY7 | Negative | 35597 - 36103 | 19268.2 |
| conserved hypothetical protein | AMJAP_0030 | P54335 | Positive | 36247 - 37290 | 38720.0 |
| dna processing protein | AMJAP_0031 | P30852 | Positive | 37318 - 38433 | 40111.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | AMJAP_0032 | Q9UY68 | Positive | 38553 - 39065 | 17532.2 |
| trna threonylcarbamoyladenosine biosynthesis protein | AMJAP_0033 | A4XNB6 | Positive | 39071 - 39628 | 20770.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
